Smoked chili peppers add new dimensions to your cooking and recipes, and it’s a great way to preserve a bountiful harvest. Here is how to smoke them at home.

How to Smoke Chili Peppers
If you’ve ever had a chipotle pepper, you’ve had a smoked pepper. There are many ways to preserve your chili pepper harvest, including drying peppers, freezing peppers, pickling peppers and more, though most people don’t consider smoking chili peppers as a way to keep your harvest.
It’s time to consider this method more fully.
Smoking chili peppers allows you to incorporate new flavor elements into your dishes. Consider substituting fresh or roasted peppers for lightly smoked peppers for a nuanced smoky changeup.
Or, smoke and dry them completely then grind them into powders for your own custom smoked chili powder blend. This is what I love to do.
Combine smoked chili powder with other ingredients for homemade rubs and seasonings that you can sprinkle over dishes or create roasted or grilled meats that no one has ever tried before.
Use them at your next party and truly WOW your guests. They’ll be begging you – “Where did you get this seasoning? I simply must have some!”
You can swell with pride as you withhold your new secret ingredient. Or feel free to share! Smoked chili peppers should be enjoyed by all!
Let’s talk about how to smoke peppers.

How to Smoke Chili Peppers
First, wash and dry your chili peppers. Make sure they are free from dirt, and use only the freshest of peppers. If they show any signs of rot, toss them out.
Next, slice the peppers in half and core them out, if desired. You don’t need to, though. I keep them intact as most of the heat is within the pepper innards.
Again, if you see any rot, toss them out. Also, if the peppers are thicker walled, you can slice them into quarters or rings, therefore increasing the surface area for the smoke to penetrate.
Next, prepare your smoker and heat it to 200 degrees F. Set the peppers on a tray or over aluminum foil so they don’t fall through your grates and set them into the smoker. You’ll need to follow your own smoker instructions for maintaining your overall temperatures.
You can also use your grill with a smoker box, as long as you are able to maintain a constant temperature.
Next, get your smoke going. There are many different wood options available to you. I prefer maple wood, though mesquite is a good choice, as is hickory.
Here you should really experiment with wood of your choice, as each will impart a different smoky flavor. Use enough wood to smoke the peppers for 2-3 hours.
3 is best, as it takes a while for the wood smoke to truly permeate the peppers, but check on them at the 2 hour mark to make sure everything is OK. At this point, the peppers will be smoked but not completely dried. Thinner peppers will be dryer than others.
If smoking thinner walled peppers like habanero peppers, smoke them for less time if you plan on using them in a non-dried form.
You can use them in different recipes at this point if you’d like. Freeze them for future meals or preserve them in oil, or just hold them in the fridge where they will last a couple days.
You can smoke longer if you’d like, as the peppers will not be completely dried after 3 hours. It will take many more hours to completely dry the peppers in the smoker, but I prefer a different method to finish the process.
Finally, dry your smoked peppers in a dehydrator. A dehydrator is the most efficient way to completely dry chili peppers. Transfer the smoked peppers to your dehydrator trays and dehydrate them at 125 degrees F for about 8-10 hours, or until they are completely dried through.
At this point, you can store the pods in sealable containers and use them as needed.

What to do with Smoked Dried Chili Peppers?
Smoked and dried chili pods can be rehydrated in hot water and used in any number of dishes. See How to Rehydrate Chili Peppers.
Alternatively, crush them and sprinkle over foods, or grind them into powders for making new blends and seasonings, or just sprinkle them as they are for a nice touch of smoked chilies.
Be sure to use gloves if handling hotter peppers, as they may irritate your skin. This is particularly true of superhot peppers.
Check out our information for How to Dehydrate Chili Peppers and Grind them Into Chili Powders.
2 pounds of chopped pepper pods yields about 3-4 cups of dried peppers, and when ground, yields about 1 cup of powder.
I made some smoked chili powder with my yield. Use in as you would any recipe that calls for chili powder. It adds a nice smoky element to the dish.

How to Make Homemade Chipotles and Chipotle Powder
Chipotles are nothing more than dried smoked jalapeno peppers. They are typically made from red jalapenos, so follow the instructions above with your selection of jalapeno peppers.
Use a milder wood to impart a lighter smoke flavor. Once smoked and dried, you are free to store them and rehydrate them as needed, or grind them up, per above, into a perfect homemade chipotle powder.
Enjoy!
Check Out Some of My Other Homemade Seasoning Blends
If you enjoy this recipe, I hope you'll please share it on social media. Don't forget to tag us at #ChiliPepperMadness. I'll be sure to share! Thanks! -- Mike H.

How to Smoke Chili Peppers (Recipe Method)
Ingredients
- 1 pound chili peppers
Instructions
- First, wash and dry your chili peppers. Make sure they are free from dirt, and use only the freshest of peppers. If they show any signs of rot, toss them out.
- Next, slice the peppers in half and core them out, if desired. You don’t need to, though. I keep them intact as most of the heat is within the pepper innards. (Again, if you see any rot, toss them out. Also, if the peppers are thicker walled, you can slice them into quarters or rings, therefore increasing the surface area for the smoke to penetrate.)
- Next, prepare your smoker and heat it to 200 degrees F. Set the peppers on a tray or over aluminum foil so they don’t fall through your grates and set them into the smoker. You’ll need to follow your own smoker instructions for maintaining your overall temperatures.
- You can also use your grill with a smoker box, as long as you are able to maintain a constant temperature.
- Next, get your smoke going. There are many different wood options available to you. I prefer maple wood, though mesquite is a good choice, as is hickory. Here you should really experiment with wood of your choice, as each will impart a different smoky flavor. Use enough wood to smoke the peppers for 2-3 hours. You can use them as desired at this point. Or dry them.
- Finally, dry your smoked peppers in a dehydrator. A dehydrator is the most efficient way to completely dry chili peppers. Transfer the smoked peppers to your dehydrator trays and dehydrate them at 125 degrees F for about 8-10 hours, or until they are completely dried through.
- At this point, you can store the pods in sealable containers and use them as needed.
Notes
Nutrition Information

Red says
It seems like the chipotle in adobo you get in a can that the skins have been removed. I've done jalapenos the way described here but I'm thinking this season of first fire roasting the jalapenos and removing the skins and then smoking and dehydrating them. Has anyone here done it that way?
Mike Hultquist says
I haven't done it this way, but I can't see why it wouldn't work. Let me know how it goes if you do it!
Stephanie Reeves says
could I do this in my AF dehydrated?
Mike Hultquist says
Do you mean dehydrate them in your air fryer with the dehydrator setting? That should work. Main thing is don't use too much heat, or they can scorch and not dry out properly.
Duke Munger says
I take red ripe Chile peppers and smoke them for 2 to 3 hours at 200° usually over sugar maple. Then I use half smoked and half raw peppers with a 3% brine and ferment them for 3 to 6 weeks and make a fermented hot sauce with that unique smoky flavor. Friends and family love it!
Mike Hultquist says
Yes, fermented smoked peppers are outstanding. Great way to use them!
Sparki says
Mike, are canned Chipotles smoked Jalapeños then dehydrated then added to adobo sauce?
Mike Hultquist says
Sparki, that is correct.
Paul Lueders says
Hey Mike,
I grow 6 fifty-foot rows of different peppers every year, and I have an 8 x 10 concrete slab and I'd like to build a smokehouse on it. Do you have any thoughts or ideas on a design for using it to smoke peppers? This is going to be my spring project this year. (I grow Jalapenos, Poblanos, Guajillos, cayennes, & serranos)
Thanks,
Paul Lueders Lac du Flambeau, Wisconsin
Mike Hultquist says
Paul, I wish I could help here, but that's out of my range. I smoke pods in a cabinet smoker on trays that allow the smoke to get to them, then finish them in my dehydrator. Works for me. I'd love to see your finished smoker set up!
Lynn says
I have read on other sites that pecan wood is traditional for smoking fully ripe jalapeños to make chipotles. What has been your experience with pecan vs. other woods?
Mike Hultquist says
Lynn, milder woods, like fruit woods, are ideal for making chipotles, as the smoke is very important. Pecan if very commonly used. However, you can use any to your flavor preference.
Eric M says
I've been smoking peppers for a few years now for the purpose of making hot sauces. I smoke at 140 degrees in my box smoker and then ferment the reciepe for 12 to 16 weeks. The smoke flavor really comes through in the end, especially with habanaros and super hots... highly recommend! the exact same set of ingredients comes out markedly different and far better with the smoked peppers
Mike H. says
Thank you!